RedOxiBase: View Perox 9917

Entry information : GzDyPrx

Entry ID	9917
Creation	2011-12-06 (Christophe Dunand)
Last sequence changes	2011-12-06 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2012-04-23 (Catherine Mathe (Scipio))

Peroxidase information: GzDyPrx

Name

GzDyPrx

Class

DyP-type peroxidase B [Orthogroup: DyPrxB001]

Taxonomy

Eukaryota Fungi Ascomycota Sordariomycetes Nectriaceae Gibberella

Organism

Gibberella zeae (anamorph Fusarium graminearum) [TaxId: 5518 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	GzDyPrx start..stop	S start..stop
HpulDyPrx	429	1e-152	10..314	10..314
FoDyPrx	427	8e-152	10..316	4..310
PEchDyPrx03	427	1e-151	1..314	1..313
OmaiDyPrx	424	2e-150	9..316	8..313

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	5127882..5128838	957
join(5127882..5128838)

Literature and cross-references GzDyPrx

DNA ref.	JGI genome: Supercontig_3.2 (5127882..5128838)
Cluster/Prediction ref.	JGI gene: 5338

Protein sequence: GzDyPrx

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	319
PWM (Da):	34896.47
PI (pH):	5.22

Sequence 0
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MSMLNVASCQ AVDAVLTRCA TFLTFKAKSD ASNLAVIRAT LGSISDLTKN VAIRDLRSNL TCTVSIGSDF WDRLTHAQRP KELRPLPVIK GRVHATVSTP ADLLFHIRSD RRDLCFELER QVMDRFGNSV QLTDSTVGFR YFDARDLLGF VDGTANPVGQ ATMRSAIVTS ETDEAAAGGS YVVVQKYLHD LAGWKKLKVE EQESIIGRTK VENMELDDAA EGKQAAHKTL ASITDGNGNE
VDIVRDNMPF GSPASDEFGT YFIGYSSKLW VIEKMLERMF VGSPPGMHDR ILDYSTPVTG CTFFAPSADM LDSLADVED

Retrieve as FASTA

Remarks

Complete sequence from genomic (no intron).

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGAGTATGC TCAATGTTGC TTCGTGTCAG GCCGTCGACG CCGTCCTTAC CAGGTGCGCC ACGTTCTTAA CCTTCAAGGC AAAATCAGAC GCCAGCAATC TTGCTGTCAT TCGCGCAACC TTGGGCAGCA TAAGCGACCT CACCAAGAAT GTCGCCATCC GGGATCTCCG CTCCAACCTC ACATGCACAG TTAGCATTGG AAGCGACTTT TGGGACCGCC TAACCCATGC GCAACGGCCC AAGGAGCTTC GTCCCCTCCC TGTCATCAAG GGTCGCGTTC ATGCCACTGT CTCGACCCCA GCAGATTTAC TGTTCCACAT TCGCTCCGAC AGGAGGGATT TATGCTTTGA GCTCGAGCGA CAGGTCATGG ACAGATTTGG GAATTCTGTC CAGCTCACAG ACTCGACAGT TGGATTTCGC TACTTTGACG CGCGAGATCT CCTTGGCTTT GTTGACGGCA CCGCCAACCC TGTAGGACAA GCAACCATGC GCTCAGCAAT CGTCACAAGC GAAACCGATG AAGCAGCAGC AGGAGGTAGC TACGTTGTGG TGCAAAAATA TCTCCATGAT TTAGCAGGTT GGAAGAAGCT CAAAGTCGAA GAACAAGAAT CCATCATTGG ACGCACCAAG GTTGAGAATA TGGAGCTCGA TGATGCGGCT GAGGGGAAAC AGGCGGCGCA TAAGACACTA GCTTCAATTA CGGACGGCAA CGGCAATGAG GTGGACATTG TCAGGGACAA CATGCCATTC GGCTCGCCTG CTTCGGACGA GTTTGGCACG TATTTTATTG GGTATTCGTC AAAGCTATGG GTTATAGAGA AGATGCTGGA GCGCATGTTT
GTCGGGTCAC CACCTGGTAT GCATGATAGG ATCTTGGACT ATTCTACCCC TGTGACTGGG TGTACTTTCT TTGCACCGTC AGCAGATATG CTTGACAGTC TTGCTGATGT TGAAGAC

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA