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Entry information : Pcar1CysPrx01
Entry ID 9919
Creation 0000-00-00 (Christophe Dunand)
Last sequence changes 2011-12-08 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-04-06 (Catherine Mathe (Scipio))
Peroxidase information: Pcar1CysPrx01
Name Pcar1CysPrx01
Class 1-Cysteine peroxiredoxin    [Orthogroup: 1CysPrx001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Corticiaceae Phanerochaete
Organism Phanerochaete carnosa    [TaxId: 231932 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value Pcar1CysPrx01
start..stop		 S start..stop
Pc1CysPrx01 406 1.24e-146 1..222 1..222
Ab1CysPrx_bisporus 384 1.04e-137 1..221 1..221
Hcy1CysPrx 377 5.78e-135 1..222 1..222
Athi1CysPrx01 373 1.2e-133 1..222 1..222
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2783850..2783945 94 N° 2 2783723..2783793 69 N° 3 2783535..2783670 134 N° 4 2783390..2783482 91
N° 5 2783227..2783332 104 N° 6 2783038..2783168 129 N° 7 2782942..2782977 34  
complement(join(2782942..2782977,2783038..2783168,2783227..2783332,2783390..2783 482,2783535..2783670,2783723..2783793,2783850..2783945))


exon

Literature and cross-references Pcar1CysPrx01
DNA ref. JGI genome:   scaffold_2 (2783945..2782942)
Cluster/Prediction ref. JGI gene:   170200
Protein sequence: Pcar1CysPrx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   222
PWM (Da):   %s   24859.83  
PI (pH):   %s   6.31
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MPSLRLGNTAPDFEAETTQGPIKFHNWIGNHWAILFSHPGDFTPVCTTELAEVARLKPDFEKRGVKLIGISANGLEDHYKWAKDIEEWGAQFGPTTVDFPIADADRKIATLYDMLDEQDP
TNVDAKGLPFTIRTVFIIDPKKTIRLMLAYPASTGRNFDEIIRVTDSLQIGDKHRVTTPANWKKGDDVIVHPSVSTEEAKTLFPEHTVHPYLRTTPLKVD*

Retrieve as FASTA  
Remarks Complete sequence from genomic
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCTTCTCTCCGTCTTGGAAACACAGCCCCCGACTTTGAAGCCGAGACGACCCAGGGACCCATCAAGTTCCATAACTGGATCGGCAACCATTGGGTACGCAGTGTGCCGTGCATTTTC
GCGTGTTATCGTTGAACGCGGGGTATTCGCAGGCGCCATCCTGTTCTCCCATCCCGGCGACTTCACGCCTGTCTGCACGACTGAGCTTGCCGAGGTGGCGCGCCTGTATGTTCACGTTAG
ACATGCTTGCAGCTCGAGATGTTAATGAATGATGTAGCACAAACCTGACTTTGAGAAGCGAGGTGTGAAGCTGATCGGGATCTCCGCTAACGGACTCGAGGACCACTACAAGTGGGCGAA
GGACATTGAAGAGTGGGGTGCGCAATTTGGGCCAACGACTGTTGATTTCCCTATCGTACGTCCATACTCAGGGCTATCAACTAATTGTGTGCTGAAGAGCCGGCCAGATATTGCGGATGC
GGATCGCAAGATTGCCACGCTTTACGACATGCTTGACGAGCAGGATCCGACCAATGTTGATGCAAAGGGGCTTCCCTTCACCGTATGTTTACTTCGCATGGTGTCCAGGTCTGACTATAG
ACAATAACGATCCCATCAGATATCCGCACTGTCTTCATCATCGACCCCAAGAAGACCATCCGTCTGATGCTTGCCTACCCTGCATCGACTGGACGCAACTTCGACGAGATCATTCGTGTT
ACTGACTGTGCGTACATTGCAAGGCAGCCCTACCAGAATTTCACACGTACTAACAATCGCTGCAGCTCTCTCCAGATTGGCGACAAGCACCGTGTTACAACGCCCGCCAACTGGAAGAAG
GGCGACGACGTTATCGTCCATCCGTCTGTTAGCACCGAGGAGGCGAAGACTCTGTTCCCCGAGCACACCGTTCACAAGGCATGTGTTCGCTGTCGGCCTTGCGTACGGTCGGGTACTGAC
ATCCAACACTCTTTGCAGCCCCTTACCTCAGGACCACCCCGCTCAAGGTTGATTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCTTCTCTCCGTCTTGGAAACACAGCCCCCGACTTTGAAGCCGAGACGACCCAGGGACCCATCAAGTTCCATAACTGGATCGGCAACCATTGGGCCATCCTGTTCTCCCATCCCGGC
GACTTCACGCCTGTCTGCACGACTGAGCTTGCCGAGGTGGCGCGCCTCAAACCTGACTTTGAGAAGCGAGGTGTGAAGCTGATCGGGATCTCCGCTAACGGACTCGAGGACCACTACAAG
TGGGCGAAGGACATTGAAGAGTGGGGTGCGCAATTTGGGCCAACGACTGTTGATTTCCCTATCATTGCGGATGCGGATCGCAAGATTGCCACGCTTTACGACATGCTTGACGAGCAGGAT
CCGACCAATGTTGATGCAAAGGGGCTTCCCTTCACCATCCGCACTGTCTTCATCATCGACCCCAAGAAGACCATCCGTCTGATGCTTGCCTACCCTGCATCGACTGGACGCAACTTCGAC
GAGATCATTCGTGTTACTGACTCTCTCCAGATTGGCGACAAGCACCGTGTTACAACGCCCGCCAACTGGAAGAAGGGCGACGACGTTATCGTCCATCCGTCTGTTAGCACCGAGGAGGCG
AAGACTCTGTTCCCCGAGCACACCGTTCACAAGCCTTACCTCAGGACCACCCCGCTCAAGGTTGATTGA

Retrieve as FASTA