Entry information : SiPrx[P]173
Entry ID 9939
Creation 2011-11-25 (Qiang LI)
Last sequence changes 2011-12-14 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2011-12-14 (Qiang Li)
Peroxidase information: SiPrx[P]173
Name SiPrx[P]173
Class Class III peroxidase     [Orthogroup: Prx053]*
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Setaria
Organism Setaria italica    [TaxId: 4555 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SiPrx[P]173
start..stop
S start..stop
SiPrx167 269 3e-91 1..178 143..319
SbPrx05 237 9e-79 1..178 145..324
ZmPrx113 224 2e-73 1..178 170..342
SpolPrx28 128 2e-36 1..179 138..322
Literature and cross-references SiPrx[P]173
DNA ref. Phytozome 12:   scaffold_9 (50804479..50803788)
Protein sequence: SiPrx[P]173
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   191
PWM (Da):   %s   19591.88  
PI (pH):   %s   8.51
Sequence
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Send to Peroxiscan
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LPTGRMDGTV SSSGDVNLPS PSAxxxEALS TFRSIGLGIV DLTTLLGVHT MGFCHCGLIM NRLYNCISTS PFDAAAMDAG LFAVLRHRYP PHVVTPQNES HDAIVPANFV APLGTFGLDN 
SSCPSVPAGR AVLQTDKELT SSGxASRIAA MFASGPGNFR RQFAKSMVKP GSVDVRLGCM ASWPLIKRLL L 

Retrieve as FASTA  
Remarks Pseudogene from genomic (Both 5' end and 3' end are missing; Gap in frame; Undetermined AA due to nnnnnn in DNA.) No prediction from phytozome.
DNA
Send to BLAST
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CTGCCCACGG GGAGAATGGA CGGCACCGTG TCCAGCTCGG GCGACGTGAA CCTGCCGAGC CCCTCCGCCn nnnnnnnnGA GGCCTTGTCC ACCTTTCGCT CCATAGGCCT CGGCATCGTT  GATCTCACCA CCCGTAATAC ATCCGAAATT TCGAATCAAA TTGTGACATA TATTGCTCAT CTAATTTTGG ACCGAACATT CAAATTAAAG TGGTAGCATT TCGTATGTAT GCTCTTTTCT  TAAAAATAAA CCTGGCAGGT GCATACCATG GGGTTTTGCC ACTGCGGGCT CATCATGAAC AGGCTCTACA ACTGCATCAG TACCAGCCCG TTCGACGCGG CCGCCATGGA CGCCGGCCTG  TTCGCCGTGC TCCGGCACCG TTACCCGCCG CACGTGGTGA CGCCACAGAA CGAGTCGCAC GACGCGATCG TGCCCGCGAA CTTCGTCGCG CCGCTCGGCA CCTTCGGCCT CGACAACTCC  TCCTGCCCGA GCGTGCCCGC CGGGAGGGCC GTCCTGCAGA CCGACAAGGA GCTCACGTCC TCCGGTGTnG CCAGCCGGAT CGCGGCCATG TTCGCGTCGG GGCCGGGAAA TTTCCGGAGG 
CAGTTCGCCA AGTCCATGGT GAAGCCGGGA AGCGTGGACG TCCGGTTGGG CTGCATGGCC AGTTGGCCAC TGATAAAAAG ACTCCTTCTA TAA 

Retrieve as FASTA