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Entry information : PpeAPx-R (ppa015878m)
Entry ID 9945
Creation 2011-12-13 (Qiang Li)
Last sequence changes 2011-12-13 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2012-01-31 (Christophe Dunand)
Peroxidase information: PpeAPx-R (ppa015878m)
Name (synonym) PpeAPx-R (ppa015878m)
Class Ascorbate peroxidase related    [Orthogroup: APx-R001]
Taxonomy Eukaryota Viridiplantae Streptophyta Rosaceae Prunus
Organism Prunus persica (peach)    [TaxId: 3760 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PpeAPx-R
start..stop		 S start..stop
MdAPx-R 537 0 1..319 1..323
VvAPx-R 423 4.33e-150 23..319 22..330
RcAPx-R 415 5.74e-147 22..319 18..328
CclAPx-R 414 3.74e-146 6..319 12..335
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9945' 'complement(join(39191187..39191286,39191872..39191929,39192394..39192509,39192666..39192749,39193009..39193105,39193196..39193238,39193391..39193461,39193704..39193831,39193921..39194032,39194157..39194304))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 39194157..39194304 146 N° 2 39193921..39194032 110 N° 3 39193704..39193831 126 N° 4 39193391..39193461 69
N° 5 39193196..39193238 41 N° 6 39193009..39193105 95 N° 7 39192666..39192749 82 N° 8 39192394..39192509 114
N° 9 39191872..39191929 56 N° 10 39191187..39191286 98  
complement(join(39191187..39191286,39191872..39191929,39192394..39192509,3919266 6..39192749,39193009..39193105,39193196..39193238,39193391..39193461,39193704..3 9193831,39193921..39194032,39194157..39194304))


exon

Literature and cross-references PpeAPx-R (ppa015878m)
DNA ref. Phytozome 12:   scaffold_1 (39194304..39191187)
Protein sequence: PpeAPx-R (ppa015878m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   319
PWM (Da):   %s   34228.66  
PI (pH):   %s   6.55
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MASTTCTVSLISSTKSSSTFPLKFNFPAKSPSTVNLRANPLTAANAASSGKDLVLGRRGLVFTLTATLPLLLPFSECIEAFAAKAVESDISEYELVKEEIRKVVTKGKAAGVLRLVFHDA
GTFQVDENGGMNGSVIYELDRPENKGLKSPFILEKAKSEVDTVQPVSWADMISVAGAEAVSICGGPTIQVSLGRLDSKEPDPEGKLPAESLDAFALRQSFQTKGFSTQELVALSGAHTIG
NKGFGSPTVFDNTYFKILLEKPSGSMIGLPSDRALAKDDECLRWITKYAEDQDVFFEDFKKAYVKLVNSGARWKS

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 1, 9 introns). No EST.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCATCAACTACCTGCACCGTCTCCCTTATCTCCTCCACTAAATCTTCCTCCACATTCCCATTAAAATTCAATTTTCCCGCCAAATCCCCCTCAACGGTCAATTTGCGCGCCAACCCT
CTCACCGCCGCCAACGCCGCTTCTTCAGGTAAAAGCAAGCACAACCCTAATGAAGCACGGATTAGATTAGGTGTTGACTGTGTTGGGTTGCTTAGAACAATGGAAGGAAGCTGAATTGTA
CTATTTGATGCACCAATTATTCAAAATCACAGGAGAAAAGATCTCGTCTTGGGAAGAAGAGGACTGGTATTTACACTTACAGCCACACTGCCATTGCTTCTTCCCTTCTCTGAATGCATA
GAGGCCTTTGCTGCGAAGGCGGTAGAGTGAGTTAAACAAAATCTTCAATCTTTTCAATTTGTGGGTATTGATATGTGCAAAGTAATTACTGGGTTTTTTCTGTGACATTTGAAAGGTGTC
GGATATAAGTGAATATGAGCTTGTGAAGGAGGAGATTAGGAAGGTGGTGACCAAGGGTAAGGCTGCTGGTGTGCTTCGTTTGGTGTTTCATGATGCAGGGACCTTTCAAGTTGATGAGAA
TTCAGGTATCTATATTTGTATGCATTAGCCATTGCTTTTTACTCATTTCCATGGCTGCATTGGCCTTTCAAATTGAAGCAATATCAACTGGAATTGGGATTCATATACGAATGGTTCAGA
TTTGTTGTGAGTAGCCAATACACGAATGGTTCAGATTTGTTGCATTGCACAATCAATTGCCAACCACTGACATGTGTTCCTTTGAAATATAGATATTGTCTGAAGTTCATTCATGTTGTT
ATTGCAGGTGTGGCATGAATGGTTCTGTCATTTACGAACTTGATAGACCAGAAAATAAAGGTCTTAAAAGTCCTTTCAAGGCATGCCCTCTCTCTCTTATATGTGTATCTGTTCATTAGT
TTCCATCGAATTCCCAAATTCTTAATTTGTTGAACAAAGATATCGATTAAATAAAAGTCGTTTAAACGATCTTCTACCAGCTAACTTCTCAGTGGATTAAATTGTTGGTTAGATATTCTA
GAGAAAGCAAAGAGTGAGGTGGATACAGTACAACCAGGTTTCTATCTTCTGAAATACTGTTTGACTAGGTTTCTGTATTAATGGTTGTTTTAGTGCTGTGCTAACGTGTGGATGTTTCCA
AAATTAGTGTGTCTTGGGCAGACATGATTTCTGTGGCTGGAGCTGAAGCAGTTTCAATATGTGGAGGTCCAACAATCCAAGTTTCGTTGGGCAGATTAGATTCAAAGTAAGCTGCATCAA
TGGAAAAACAACCTCATGCTTGAATCCTCAATATTTCAGTTGCCAAGTATTATTAATGCTACTAGAAATACTATAAAGAAAAAGAAAAAAGTAGAGTTAGTGGAAAGAAAACTAAGTCTT
GTTTCTCTGCAGCATTAATATGGAGAATCAATCTAATCCTATCCTACCAAAAATTGATAATTCCAATTTTTAGAAATGACATTGTGAATAGCTACTTATCTCATTCTCTCATCTTTTTGT
TTTAGGGGGAGCCTGATCCTGAAGGAAAACTTCCTGCAGAATCTCTGGATGCCTTTGCTCTGAGGCAAAGCTTTCAAACAAAAGGCTTTTCGTGAGTTCATATATGCTAAAAGATACCTT
TTTCAATTTGTATGTTGTAGATGTATTTTTTTTCCTTTTTGTAAGTAAAGCACCGGGGAAAAGTTTATCATCCCAGTCTCTGCTTGGTACAGGTTTAAACTAAAACGTGACTGTTTTGTT
TTTGCAGAAAACTCAAGAACTTGTTGCTCTGTCAGGAGCTCATACCATTGGAAATAAAGGTTTCGGAAGTCCAACAGTTTTTGACAATACATACTTCAAAATTCTGCTTGAGAAACCATC
TTCGGGTAAATAACAGTGACTTGGATAATCTGCATATCAAAACAGGCTTAAAGAGAAACCCCCTGCACTCACTTAAGCTCGCCCCTCTTGTGGAGTTCATGTTACAAACTTACAACATGA
GATAATAACAGAAAAAAAGGAACATAAAGAGTAATCATGTTCTTTGAGTAATTGCTTTTTCATAAGAGTGAATTTCAATTTTTGTTTGATCTTGAATCAGATTATATTTTTCATTTTCAT
GCACAAGTACGATTTAATCAATTTGCTTGATTAATATGGTCCCTCTTCTTTTTTTTTTCCCCACTGAATGCATGCTTTCATGCGATCCATGATAAAGGGAAAACATTATTGCGACTTATC
TTTACACCTCTAAAAATTCATGACTTTGTGTGCATTTATTTTCTCCCCTTGTGAAAGTTTCTTTTTCTTTGCTGTGCGCGCGGTTACTGATTCTATTCTTTGCATGCAGGTGTAGTATGA
TTGGGCTTCCTTCAGATCGTGCGCTTGCCAAGGATGATGAATGCTTAAGGTCTATTTTCTTTCAAAAACTTTCAGCTGTCCTTTTTACTGCTATTCCATATGTTGATAAGCATTTAAGCC
AGCCAAACCAGTTATTTAAACAAGTATTGAAATGAATGTAATTCGGCTGGAAGACTTCGAAATAAAGAGCGAATATCTCTTTAAACAGTAGTTATGCAAGACAAATCTAATTTAGGTTAA
ATCAATCCACAAGTTCTTTACATTAGTTGAGATAATGATCATCACATGTTTTTTTTCTTTTGTAGAAAGAAAATGTAAGGGTTTAAGTCTGTATCTAATTATCTGGATTTGGAAATGAAA
TGAAAATTTGTCACGTTGCCTTGAGCTAGCCAACTAATTTAGTTACTTTGACTTACATATTTCTCATAGATATATGTCTGATTATCTGATATGTTTATGCTCTAGTAATCAGAAAGTTAT
TAGATATTGCCTAATCCATGCAAGCTAAACGCATACGTTTTCGGTATACACGAGTATTCATTTGCATTGTAGGTATCAACTTTCATGTTTATGTTACATGTAGTATGTGTTTTGTATTCA
TATCCGACTGAAGAGAAGCTTATTTCGTGTACAGATATGGATCACAAAGTATGCTGAGGACCAGGACGTTTTCTTTGAAGATTTCAAGAAGGCTTATGTCAAACTAGTGAATTCAGGAGC
CAGGTGGAAGAGCTTG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCATCAACTACCTGCACCGTCTCCCTTATCTCCTCCACTAAATCTTCCTCCACATTCCCATTAAAATTCAATTTTCCCGCCAAATCCCCCTCAACGGTCAATTTGCGCGCCAACCCT
CTCACCGCCGCCAACGCCGCTTCTTCAGGAAAAGATCTCGTCTTGGGAAGAAGAGGACTGGTATTTACACTTACAGCCACACTGCCATTGCTTCTTCCCTTCTCTGAATGCATAGAGGCC
TTTGCTGCGAAGGCGGTAGAGTCGGATATAAGTGAATATGAGCTTGTGAAGGAGGAGATTAGGAAGGTGGTGACCAAGGGTAAGGCTGCTGGTGTGCTTCGTTTGGTGTTTCATGATGCA
GGGACCTTTCAAGTTGATGAGAATTCAGGTGGCATGAATGGTTCTGTCATTTACGAACTTGATAGACCAGAAAATAAAGGTCTTAAAAGTCCTTTCAAGATTCTAGAGAAAGCAAAGAGT
GAGGTGGATACAGTACAACCAGTGTCTTGGGCAGACATGATTTCTGTGGCTGGAGCTGAAGCAGTTTCAATATGTGGAGGTCCAACAATCCAAGTTTCGTTGGGCAGATTAGATTCAAAG
GAGCCTGATCCTGAAGGAAAACTTCCTGCAGAATCTCTGGATGCCTTTGCTCTGAGGCAAAGCTTTCAAACAAAAGGCTTTTCAACTCAAGAACTTGTTGCTCTGTCAGGAGCTCATACC
ATTGGAAATAAAGGTTTCGGAAGTCCAACAGTTTTTGACAATACATACTTCAAAATTCTGCTTGAGAAACCATCTTCGGGTAGTATGATTGGGCTTCCTTCAGATCGTGCGCTTGCCAAG
GATGATGAATGCTTAAGATGGATCACAAAGTATGCTGAGGACCAGGACGTTTTCTTTGAAGATTTCAAGAAGGCTTATGTCAAACTAGTGAATTCAGGAGCCAGGTGGAAGAGCTTG

Retrieve as FASTA