Entry information : PcarPrxQ01
Entry ID 9976
Creation 0000-00-00 (Christophe Dunand)
Last sequence changes 2012-03-28 (Catherine Mathe (Scipio))
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2015-12-23 (Christophe Dunand)
Peroxidase information: PcarPrxQ01
Name PcarPrxQ01
Class Atypical 2-Cysteine peroxiredoxin (type Q)    [Orthogroup: PrxQ001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Corticiaceae Phanerochaete
Organism Phanerochaete carnosa    [TaxId: 231932 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PcarPrxQ01
start..stop
S start..stop
PcPrxQ 396 1.69e-142 1..223 1..231
PplPrxQ01 243 2.26e-82 5..166 3..164
PinvPrxQ02 211 1.34e-69 5..158 4..161
SbrePrxQ01 207 2.34e-68 5..160 4..163
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9976' 'join(103838..103970,104032..104082,104136..104233,104288..104406,104476..104722,104746..104772)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 103838..103970 131 N° 2 104032..104082 49 N° 3 104136..104233 96 N° 4 104288..104406 117
N° 5 104476..104722 245 N° 6 104746..104772 25  
join(103838..103970,104032..104082,104136..104233,104288..104406,104476..104722, 104746..104772)


exon

Literature and cross-references PcarPrxQ01
DNA ref. JGI genome:   scaffold_9 (103838..104772)
Protein sequence: PcarPrxQ01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   224 (308)
PWM (Da):   %s   24326.38 (33094.2)  
PI (pH):   %s   5.02 (9.53) Peptide Signal:   %s   cut: 24 range:24-331
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MPRSYPLTDKPAPPLSLPDANGQTYTLNSENVGRPVIIFFYPKSGSYGCTKEACEFRDALIERESFKTTKAQIIGISSDPVEKQKEFVEKHKLYPVLSDSNGEARQTYHIGKGLLGLVDARVTIVIDAKGIVRDSLEATMNYGAHVKFVTKWLEKLEAEEKRAS
APPPTEPGLITEPALATEPDPETAPPSTGQAHALIMPTGPENEHESSDVA
RDELGRAV*

Retrieve as FASTA  
Remarks complete sequence from genomic (5 introns).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCTCGCTCATACCCCCTCACTGACAAGCCCGCCCCGCCGTTGTCTCTTCCAGATGCCAATGGCCAGACGTACACCCTCAATTCTGAGAACGTCGGACGCCCTGTAATCATCTTCTTC
TACCCAAAATCTG
TGGTACGTCCCAACCGGGTCTCAGCAGAGATTTGGCCGTTGACGACGTGCTGCATGCGTTCAGGGTCGTATGGGTGCACTAAGGAGGCATGCGAATTTCGCGACGCC
TTGATTG
TGGTACGTGTCCTTGGAAGTCGAGCGTGAGACGGATTGGGTTCATTGGACTGCAGAAAGGGAGTCTTTCAAGACGACGAAAGCACAAATCATTGGTATCAGCTCAGACCCTGT
CGAGAAGCAGAAGGAATTCGTCGAGAAACACAAGCTAACG
CGGTACGCAATCAATGACATAGCATGGGAGAAGTCCCACTGACACTCTCATTGCAGTATCCGGTGCTCAGCGACTCGAAT
GGGGAGGCAAGACAGACATATCACATAGGCAAAGGCCTGCTTGGCCTTGTCGATGCCCGAGTGACGATCGTGATAGATGCCAAGGGCATCGTACG
CGGTAAGTGACGCTTCTGGTCTCAA
CGCCTTCCCAGACCCGCTCATCCAGAGGACTTTGACCCGATTCCAGGGACTCACTTGAAGCCACGATGAATTACGGTGCACACGTCAAGTTCGTCACTAAATGGCTCGAGAAGCTCGAGG
CCGAGGAAAAGCGGGCTTCTGCACCCCCGCCTACCGAACCTGGTCTTATCACTGAACCAGCCCTCGCAACTGAGCCCGACCCGGAAACGGCACCCCCAAGCACTGGTCAAGCTCACGCGC
TGATAATGCCGACAGGTCCTGAGAATGAGCATGAGAGCTCTGACGTGGCCCCT
CTGCTGCAACAGGGGTAACGCAAAGCGTGACGAGCTAGGCAGGGCTGTCTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCTCGCTCATACCCCCTCACTGACAAGCCCGCCCCGCCGTTGTCTCTTCCAGATGCCAATGGCCAGACGTACACCCTCAATTCTGAGAACGTCGGACGCCCTGTAATCATCTTCTTC
TACCCAAAATCTG
GGTCGTATGGGTGCACTAAGGAGGCATGCGAATTTCGCGACGCCTTGATTGAAAGGGAGTCTTTCAAGACGACGAAAGCACAAATCATTGGTATCAGCTCAGACCCT
GTCGAGAAGCAGAAGGAATTCGTCGAGAAACACAAGCTAACG
TATCCGGTGCTCAGCGACTCGAATGGGGAGGCAAGACAGACATATCACATAGGCAAAGGCCTGCTTGGCCTTGTCGAT
GCCCGAGTGACGATCGTGATAGATGCCAAGGGCATCGTACG
GGACTCACTTGAAGCCACGATGAATTACGGTGCACACGTCAAGTTCGTCACTAAATGGCTCGAGAAGCTCGAGGCCGAG
GAAAAGCGGGCTTCTGCACCCCCGCCTACCGAACCTGGTCTTATCACTGAACCAGCCCTCGCAACTGAGCCCGACCCGGAAACGGCACCCCCAAGCACTGGTCAAGCTCACGCGCTGATA
ATGCCGACAGGTCCTGAGAATGAGCATGAGAGCTCTGACGTGGCCCCT
CGTGACGAGCTAGGCAGGGCTGTCTAA

Retrieve as FASTA